Skip to main content

Copyrighting Algorithms



Each morning, as soon as I arrive in front of my computer, I generally spend a couple of minutes browsing articles of the day on arxiv.org, in particular in the "Numerical Analysis" section (and sometimes on Computational Physic, but that's when I'm in tramping mode). This systematically browsing might look a bit fastidious, but I like to have an large overview of the newest developpements.

In that topic I came across an article named "General Complex Polynomial Root Solver and Its Further Optimization for Binary Microlenses" which has a very interesting appendix (B, page 20) about the utility of patenting algorithms, in particular the discussion stands on the classical book "Numerical Recipes". In fact the author happened to write this article because they needed a different method to compute roots of complex polynomials than the one proposed in the NR book, because of copyright violation. So in some sense, they argue that "copyright and patent law are stimulating intellectual innovation".

But they point out a more general problem about the reluctance of researchers to release publicly their research code, in particular for Intellectual Property concerns which poses an other problem: reproduciability of [numerical] experiments, which is at heart of the scientific method. I thought that was interesting, so I decided to have a post on that topic.

Moreover, the cite the four page article "Practices in Code Discoverability". The title says it all.

Comments

Popular posts from this blog

Shear waves, medecine and brain

Yesterday evening, too bored by what TV was proposing to me, I decided to watch a conference of Mathias Fink , a french researcher working on multidisciplinary application of waves. Specially shear waves.  Here is a brief summary of his talk. In solids, waves have two principal components:  compression waves (P-waves for primary) moving in the direction of propagation, and shear waves (S-waves, for secondary) that make ripples in the plane orthogonal to that direction. Since compression waves propagate in the direction of propagation, they move faster than shear waves. Usually ultrasound equipment in medicine only use compressional waves. But since human tissues have a high bulk modulus, the P-wave speed is relatively constant (around 1580 m/s). Human tissues are very stiff if you apply isotropic constraints on them (like pressure of water). However M. Fink and his colleagues proposed a new way to investigate human tissues by first sending a strong compressional wave in ...

Hypnothic patterns of integrer decomposition

http://www.datapointed.net/visualizations/math/factorization/animated-diagrams/

Networks and Life

As you probably may (or may not!) know, molecular biology often study biological functions from interaction network between molecules rather than studying each component one-by-one. It's the opposite of the universal divide-and-conquer strategy, I would call it the all-inclusive strategy. Those interactions networks involves myriads (10.000) of molecules that interacts by various chemical ways, which is generally represented as an oriented graph between each molecular compound. The transcriptional networks describe the relationship between genes and proteins, the protein-protein network s defines the cascades of interactions between some, ingenuously lumped, proteins, the metabolic networks attempt to mimic the flush of metabolic reactions inside living organisms.  So the idea is to understand how the  main 'thing' works from all those interactions linked together. Of course, other kind of networks are used in many different domain to study more-or-less linked ...